An 8.8 should be at least 2 inches longer then a 35, especially using a flange mount. Thats 1" longer then a yoke mount by itself.
Unless your driveshaft was previously a bit short (probably your case Scott), the travel should be checked, and the length will probably need adjustment.
You do not want to risk botteming that shaft out. Transfer cases arent cheap, checking your lengths is.